Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC27.17■■□□□ 1.94
SCAF1Q9H7N4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 TSPY12P-201ENST00000421279 868 ntBASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 EIF2S2P5-201ENST00000457635 968 ntBASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 KRT8P20-201ENST00000423953 1409 ntBASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF1Q9H7N4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 AP000867.3-201ENST00000524675 377 ntBASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 AL158211.2-201ENST00000607282 395 ntBASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 HLA-A-209ENST00000638375 975 ntBASIC27.15■■□□□ 1.94
SCAF1Q9H7N4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
SCAF1Q9H7N4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 AL121912.1-201ENST00000603683 238 ntBASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
SCAF1Q9H7N4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 AC141586.5-201ENST00000624546 2050 ntBASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 BMF-207ENST00000559701 630 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF1Q9H7N4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC27.12■■□□□ 1.93
SCAF1Q9H7N4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms