Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.71■□□□□ 0.75
CDT1Q9H211 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.71■□□□□ 0.75
CDT1Q9H211 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.71■□□□□ 0.75
CDT1Q9H211 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 AL353801.3-201ENST00000609898 542 ntBASIC19.71■□□□□ 0.75
CDT1Q9H211 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 AC009154.2-201ENST00000621177 724 ntBASIC19.71■□□□□ 0.75
CDT1Q9H211 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.71■□□□□ 0.75
CDT1Q9H211 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CDT1Q9H211 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.71■□□□□ 0.75
CDT1Q9H211 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDT1Q9H211 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDT1Q9H211 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CDT1Q9H211 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDT1Q9H211 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 AC068472.1-201ENST00000474589 881 ntBASIC19.7■□□□□ 0.74
CDT1Q9H211 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.7■□□□□ 0.74
CDT1Q9H211 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.7■□□□□ 0.74
CDT1Q9H211 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CDT1Q9H211 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CDT1Q9H211 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDT1Q9H211 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDT1Q9H211 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
CDT1Q9H211 AC093010.1-201ENST00000473625 1624 ntBASIC19.69■□□□□ 0.74
CDT1Q9H211 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDT1Q9H211 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
CDT1Q9H211 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.69■□□□□ 0.74
CDT1Q9H211 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.69■□□□□ 0.74
CDT1Q9H211 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.69■□□□□ 0.74
CDT1Q9H211 AC012615.1-201ENST00000565797 1299 ntBASIC19.69■□□□□ 0.74
CDT1Q9H211 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.69■□□□□ 0.74
CDT1Q9H211 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.69■□□□□ 0.74
CDT1Q9H211 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.69■□□□□ 0.74
CDT1Q9H211 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.69■□□□□ 0.74
CDT1Q9H211 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.69■□□□□ 0.74
CDT1Q9H211 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDT1Q9H211 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 AC246785.2-201ENST00000432512 513 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 KRT18P65-201ENST00000439811 1286 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 AC074051.2-201ENST00000565115 352 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 Z69720.1-201ENST00000601483 472 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.68■□□□□ 0.74
CDT1Q9H211 AC090164.3-201ENST00000610780 2143 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 AC093677.2-201ENST00000600169 1863 ntBASIC19.68■□□□□ 0.74
CDT1Q9H211 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.68■□□□□ 0.74
CDT1Q9H211 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms