Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 AC024563.2-201ENST00000603282 481 ntBASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSBP3Q9BWW4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 HCG4P8-203ENST00000443049 980 ntBASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 KRT8P26-201ENST00000534154 1276 ntBASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSBP3Q9BWW4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ANO7L1-203ENST00000602586 1720 ntBASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 AC008687.5-201ENST00000593746 558 ntBASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSBP3Q9BWW4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.21■□□□□ 0.02
SSBP3Q9BWW4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.21■□□□□ 0.02
SSBP3Q9BWW4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSBP3Q9BWW4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSBP3Q9BWW4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 AC005082.1-201ENST00000413042 2259 ntBASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSBP3Q9BWW4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms