Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 GMCL1P1-201ENST00000463439 1581 ntBASIC13.96□□□□□ -0.17
LINC00479Q96M42 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 PRKY-204ENST00000533551 1019 ntBASIC13.96□□□□□ -0.17
LINC00479Q96M42 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00479Q96M42 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00479Q96M42 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LINC00479Q96M42 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC00479Q96M42 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00479Q96M42 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 MIR4758-201ENST00000577688 71 ntBASIC13.95□□□□□ -0.18
LINC00479Q96M42 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 AC004264.1-201ENST00000608354 794 ntBASIC13.95□□□□□ -0.18
LINC00479Q96M42 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00479Q96M42 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00479Q96M42 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms