Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 AC025062.2-201ENST00000605477 670 ntBASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CASKIN1Q8WXD9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASKIN1Q8WXD9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 AC073592.3-201ENST00000625118 1834 ntBASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASKIN1Q8WXD9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 AC096633.1-201ENST00000422446 749 ntBASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CASKIN1Q8WXD9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
CASKIN1Q8WXD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CASKIN1Q8WXD9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CASKIN1Q8WXD9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC28.2■■■□□ 2.1
CASKIN1Q8WXD9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CASKIN1Q8WXD9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC28.2■■■□□ 2.1
CASKIN1Q8WXD9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 AC097374.2-201ENST00000618617 1306 ntBASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASKIN1Q8WXD9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 IGHV3-22-201ENST00000520721 359 ntBASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AP000867.4-201ENST00000641616 219 ntBASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 PHGDH-209ENST00000641074 1780 ntBASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AC010460.3-201ENST00000511359 1579 ntBASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 AC106730.1-201ENST00000566722 1090 ntBASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC28.18■■■□□ 2.1
CASKIN1Q8WXD9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CASKIN1Q8WXD9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC28.17■■■□□ 2.1
CASKIN1Q8WXD9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.17■■■□□ 2.1
CASKIN1Q8WXD9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CASKIN1Q8WXD9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CASKIN1Q8WXD9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms