Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 AC104390.1-201ENST00000555663 520 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 GCSHP2-201ENST00000560971 527 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 AC139713.2-201ENST00000641328 2723 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SIMC1Q8NDZ2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 AL441883.1-201ENST00000566170 1045 ntBASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 AC006011.2-201ENST00000621313 1158 ntBASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 MYC-208ENST00000641036 567 ntBASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SIMC1Q8NDZ2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AP000593.1-201ENST00000393668 712 ntBASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AC117947.1-201ENST00000427448 529 ntBASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 RN7SL850P-201ENST00000579959 291 ntBASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 NEK4P2-201ENST00000580004 1012 ntBASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AC011558.1-201ENST00000623459 338 ntBASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.19■□□□□ 0.34
SIMC1Q8NDZ2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms