Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSMEM1Q8N8F7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
LSMEM1Q8N8F7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 HMGA1P5-201ENST00000412453 271 ntBASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 NEK4P2-201ENST00000580004 1012 ntBASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 FAM87A-204ENST00000613235 858 ntBASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LSMEM1Q8N8F7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LSMEM1Q8N8F7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LSMEM1Q8N8F7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
LSMEM1Q8N8F7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 AC009053.2-201ENST00000563701 2365 ntBASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 AC010240.3-201ENST00000607688 395 ntBASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms