Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 AC097488.1-201ENST00000507834 756 ntBASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
H1FOOQ8IZA3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 AC036111.1-201ENST00000533973 1582 ntBASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 MIR149-201ENST00000384879 89 ntBASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H1FOOQ8IZA3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 MIR4674-201ENST00000582457 87 ntBASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1FOOQ8IZA3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1FOOQ8IZA3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1FOOQ8IZA3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
H1FOOQ8IZA3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1FOOQ8IZA3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1FOOQ8IZA3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms