Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 METTL26-211ENST00000568077 588 ntTSL 316.8■□□□□ 0.285e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.15e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.68■□□□□ 0.15e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.07■□□□□ 05e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.16□□□□□ -0.145e-7■■□□□ 11.5
LARP4Q71RC2 LUC7L2-205ENST00000463912 2382 ntTSL 26.83□□□□□ -1.322e-7■■□□□ 11.5
LARP4Q71RC2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.094e-8■■□□□ 11.5
LARP4Q71RC2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.164e-8■■□□□ 11.5
LARP4Q71RC2 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.374e-8■■□□□ 11.5
LARP4Q71RC2 RPS10-205ENST00000480942 734 ntTSL 210.69□□□□□ -0.75e-36■■□□□ 11.5
LARP4Q71RC2 SLC16A3-218ENST00000583444 2882 nt19.18■□□□□ 0.666e-10■■□□□ 11.5
LARP4Q71RC2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.31e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-208ENST00000478266 1133 ntTSL 515.22■□□□□ 0.031e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.341e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.77□□□□□ -0.371e-7■■□□□ 11.5
LARP4Q71RC2 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.451e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-205ENST00000464057 2122 ntTSL 212.02□□□□□ -0.481e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.91□□□□□ -0.51e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-203ENST00000380120 1469 ntTSL 210.68□□□□□ -0.71e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-211ENST00000496241 1451 ntTSL 1 (best)10.52□□□□□ -0.731e-7■■□□□ 11.5
LARP4Q71RC2 GLDC-213ENST00000639443 2727 ntTSL 1 (best)10.02□□□□□ -0.811e-14■■□□□ 11.5
LARP4Q71RC2 PEX19-205ENST00000472750 3504 ntTSL 1 (best)9.02□□□□□ -0.961e-7■■□□□ 11.5
LARP4Q71RC2 AL139011.2-202ENST00000485079 914 ntTSL 38.61□□□□□ -1.031e-7■■□□□ 11.5
LARP4Q71RC2 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.191e-7■■□□□ 11.5
LARP4Q71RC2 PEX19-204ENST00000467711 205 ntTSL 37.59□□□□□ -1.191e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.88□□□□□ -1.311e-7■■□□□ 11.5
LARP4Q71RC2 TSPAN7-203ENST00000419600 1683 ntTSL 26.42□□□□□ -1.381e-7■■□□□ 11.5
LARP4Q71RC2 ECI2-206ENST00000464583 3870 ntTSL 26.16□□□□□ -1.421e-7■■□□□ 11.5
LARP4Q71RC2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.012e-9■■□□□ 11.5
LARP4Q71RC2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.052e-9■■□□□ 11.5
LARP4Q71RC2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.19□□□□□ -0.142e-9■■□□□ 11.5
LARP4Q71RC2 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.362e-9■■□□□ 11.5
LARP4Q71RC2 STMN1-207ENST00000465604 2947 ntTSL 1 (best)3.91□□□□□ -1.782e-9■■□□□ 11.5
LARP4Q71RC2 SLC25A39-210ENST00000588315 1409 ntTSL 219.04■□□□□ 0.643e-8■■□□□ 11.5
LARP4Q71RC2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.263e-6■■□□□ 11.5
LARP4Q71RC2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.112e-9■■□□□ 11.5
LARP4Q71RC2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.58■■□□□ 1.042e-9■■□□□ 11.5
LARP4Q71RC2 USF2-216ENST00000607959 1920 ntTSL 521.22■□□□□ 0.992e-9■■□□□ 11.5
LARP4Q71RC2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.433e-6■■□□□ 11.5
LARP4Q71RC2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.99■□□□□ 0.313e-6■■□□□ 11.5
LARP4Q71RC2 USF2-213ENST00000600341 1392 ntTSL 216.75■□□□□ 0.272e-9■■□□□ 11.5
LARP4Q71RC2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.57■□□□□ 0.242e-9■■□□□ 11.5
LARP4Q71RC2 USF2-211ENST00000599471 1173 ntTSL 316.36■□□□□ 0.212e-9■■□□□ 11.5
LARP4Q71RC2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.043e-6■■□□□ 11.5
LARP4Q71RC2 USF2-206ENST00000594264 2742 ntTSL 214.43□□□□□ -0.12e-9■■□□□ 11.5
LARP4Q71RC2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.22□□□□□ -0.131e-8■■□□□ 11.5
LARP4Q71RC2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.12□□□□□ -0.151e-8■■□□□ 11.5
LARP4Q71RC2 LMAN2L-206ENST00000446780 1400 ntTSL 214.07□□□□□ -0.163e-6■■□□□ 11.5
LARP4Q71RC2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.163e-6■■□□□ 11.5
LARP4Q71RC2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.173e-6■■□□□ 11.5
LARP4Q71RC2 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.88□□□□□ -0.353e-6■■□□□ 11.5
LARP4Q71RC2 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.41e-8■■□□□ 11.5
LARP4Q71RC2 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.35□□□□□ -0.433e-6■■□□□ 11.5
LARP4Q71RC2 RTFDC1-207ENST00000477573 2193 ntTSL 1 (best)12.06□□□□□ -0.481e-8■■□□□ 11.5
LARP4Q71RC2 PFDN5-217ENST00000552548 497 ntTSL 26.7□□□□□ -1.342e-17■■□□□ 11.5
LARP4Q71RC2 FAM209A-202ENST00000481560 666 ntTSL 55.83□□□□□ -1.481e-8■■□□□ 11.5
LARP4Q71RC2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.27■□□□□ 0.045e-9■■□□□ 11.5
LARP4Q71RC2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.235e-9■■□□□ 11.5
LARP4Q71RC2 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC10.67□□□□□ -0.75e-9■■□□□ 11.5
LARP4Q71RC2 CYB5A-207ENST00000583418 5913 ntTSL 28.87□□□□□ -0.995e-9■■□□□ 11.5
LARP4Q71RC2 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.75□□□□□ -1.335e-9■■□□□ 11.5
LARP4Q71RC2 ORM1-202ENST00000477456 422 ntTSL 29.05□□□□□ -0.967e-8■■□□□ 11.5
LARP4Q71RC2 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.27e-8■■□□□ 11.5
LARP4Q71RC2 COMT-208ENST00000428707 724 ntTSL 313.08□□□□□ -0.323e-8■■□□□ 11.5
LARP4Q71RC2 COMT-211ENST00000493893 354 ntTSL 312.59□□□□□ -0.393e-8■■□□□ 11.5
LARP4Q71RC2 CNPY2-212ENST00000553191 621 ntTSL 25.61□□□□□ -1.514e-7■■□□□ 11.5
LARP4Q71RC2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.883e-9■■□□□ 11.5
LARP4Q71RC2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.98■□□□□ 0.153e-9■■□□□ 11.5
LARP4Q71RC2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.44■■□□□ 1.664e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-210ENST00000440825 855 ntTSL 325.36■■□□□ 1.654e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-206ENST00000414253 2216 ntTSL 224.51■■□□□ 1.514e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.314e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-209ENST00000428120 2313 ntTSL 1 (best)22.9■■□□□ 1.264e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-201ENST00000378543 569 ntTSL 221.4■■□□□ 1.024e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-203ENST00000400918 811 ntTSL 220.66■□□□□ 0.94e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-205ENST00000401813 2543 ntTSL 1 (best)19.22■□□□□ 0.674e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-211ENST00000469733 2280 ntTSL 217.03■□□□□ 0.324e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-212ENST00000476803 701 ntTSL 216.72■□□□□ 0.274e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-214ENST00000497675 4478 ntTSL 214.06□□□□□ -0.164e-7■■□□□ 11.5
LARP4Q71RC2 FAAP20-213ENST00000487186 3576 ntTSL 213□□□□□ -0.334e-7■■□□□ 11.5
LARP4Q71RC2 LUC7L-212ENST00000443357 833 ntTSL 26.63□□□□□ -1.353e-14■■□□□ 11.5
LARP4Q71RC2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.349e-7■■□□□ 11.4
LARP4Q71RC2 RING1-202ENST00000478431 1532 ntTSL 1 (best)23.13■■□□□ 1.299e-7■■□□□ 11.4
LARP4Q71RC2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.34■□□□□ 0.851e-6■■□□□ 11.4
LARP4Q71RC2 RTL8C-203ENST00000495563 578 ntTSL 510.6□□□□□ -0.711e-6■■□□□ 11.4
LARP4Q71RC2 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.866e-7■■□□□ 11.4
LARP4Q71RC2 RTL8C-202ENST00000464369 616 ntTSL 59.53□□□□□ -0.881e-6■■□□□ 11.4
LARP4Q71RC2 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.056e-7■■□□□ 11.4
LARP4Q71RC2 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.16e-7■■□□□ 11.4
LARP4Q71RC2 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 57.99□□□□□ -1.136e-7■■□□□ 11.4
LARP4Q71RC2 NASP-218ENST00000530073 2740 ntTSL 27.73□□□□□ -1.176e-7■■□□□ 11.4
LARP4Q71RC2 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.186e-7■■□□□ 11.4
LARP4Q71RC2 NASP-210ENST00000481782 3659 ntTSL 27.28□□□□□ -1.246e-7■■□□□ 11.4
LARP4Q71RC2 NASP-223ENST00000534450 632 ntTSL 27.26□□□□□ -1.256e-7■■□□□ 11.4
LARP4Q71RC2 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.594e-7■■□□□ 11.4
LARP4Q71RC2 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.644e-7■■□□□ 11.4
LARP4Q71RC2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.242e-10■■□□□ 11.4
LARP4Q71RC2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.42□□□□□ -0.422e-10■■□□□ 11.4
LARP4Q71RC2 SRP14-203ENST00000558527 791 ntTSL 211.56□□□□□ -0.562e-10■■□□□ 11.4
LARP4Q71RC2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.328e-7■■□□□ 11.4
Retrieved 100 of 15,922 protein–RNA pairs in 219.5 ms