Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.71■□□□□ 0.1
COLCA1Q6ZS62 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC132938.6-201ENST00000623828 1655 ntBASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 RCN1P1-201ENST00000400413 996 ntBASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AK4P3-201ENST00000418260 669 ntBASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC024563.2-201ENST00000603282 481 ntBASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.7■□□□□ 0.1
COLCA1Q6ZS62 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 LINC00167-201ENST00000530583 1419 ntBASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 AC063952.2-201ENST00000498792 1227 ntBASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 AP000997.3-201ENST00000623333 2250 ntBASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COLCA1Q6ZS62 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms