Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CDR2Q01850 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDR2Q01850 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.46■□□□□ 0.71
CDR2Q01850 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CDR2Q01850 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR2Q01850 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 AC093010.1-201ENST00000473625 1624 ntBASIC19.46■□□□□ 0.71
CDR2Q01850 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDR2Q01850 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.46■□□□□ 0.71
CDR2Q01850 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR2Q01850 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CDR2Q01850 SLC25A6P5-201ENST00000435663 894 ntBASIC19.45■□□□□ 0.7
CDR2Q01850 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.45■□□□□ 0.7
CDR2Q01850 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 MIR3917-201ENST00000580971 93 ntBASIC19.45■□□□□ 0.7
CDR2Q01850 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.45■□□□□ 0.7
CDR2Q01850 AL138966.2-201ENST00000621997 464 ntBASIC19.45■□□□□ 0.7
CDR2Q01850 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR2Q01850 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR2Q01850 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR2Q01850 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CDR2Q01850 AP000523.1-201ENST00000398242 1049 ntBASIC19.44■□□□□ 0.7
CDR2Q01850 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.44■□□□□ 0.7
CDR2Q01850 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.44■□□□□ 0.7
CDR2Q01850 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.44■□□□□ 0.7
CDR2Q01850 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 AC141257.4-201ENST00000634557 245 ntBASIC19.44■□□□□ 0.7
CDR2Q01850 AC136944.6-201ENST00000634818 245 ntBASIC19.44■□□□□ 0.7
CDR2Q01850 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.44■□□□□ 0.7
CDR2Q01850 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR2Q01850 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR2Q01850 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms