Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.46■□□□□ 0.39
VSX2P58304 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.46■□□□□ 0.39
VSX2P58304 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.46■□□□□ 0.39
VSX2P58304 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.46■□□□□ 0.39
VSX2P58304 RNF126P1-202ENST00000569893 925 ntBASIC17.46■□□□□ 0.39
VSX2P58304 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.46■□□□□ 0.38
VSX2P58304 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VSX2P58304 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VSX2P58304 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VSX2P58304 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.45■□□□□ 0.38
VSX2P58304 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.45■□□□□ 0.38
VSX2P58304 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.45■□□□□ 0.38
VSX2P58304 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.45■□□□□ 0.38
VSX2P58304 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.45■□□□□ 0.38
VSX2P58304 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.45■□□□□ 0.38
VSX2P58304 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.45■□□□□ 0.38
VSX2P58304 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VSX2P58304 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.45■□□□□ 0.38
VSX2P58304 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
VSX2P58304 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.45■□□□□ 0.38
VSX2P58304 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VSX2P58304 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
VSX2P58304 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VSX2P58304 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.44■□□□□ 0.38
VSX2P58304 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.44■□□□□ 0.38
VSX2P58304 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VSX2P58304 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.44■□□□□ 0.38
VSX2P58304 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.44■□□□□ 0.38
VSX2P58304 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.44■□□□□ 0.38
VSX2P58304 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.44■□□□□ 0.38
VSX2P58304 AC069148.1-201ENST00000608741 768 ntBASIC17.44■□□□□ 0.38
VSX2P58304 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.44■□□□□ 0.38
VSX2P58304 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VSX2P58304 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VSX2P58304 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
VSX2P58304 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
VSX2P58304 Z83836.1-201ENST00000624605 1642 ntBASIC17.43■□□□□ 0.38
VSX2P58304 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VSX2P58304 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.43■□□□□ 0.38
VSX2P58304 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VSX2P58304 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 TSPY22P-201ENST00000427496 604 ntBASIC17.43■□□□□ 0.38
VSX2P58304 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 BX276092.5-203ENST00000456199 560 ntBASIC17.43■□□□□ 0.38
VSX2P58304 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.43■□□□□ 0.38
VSX2P58304 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.43■□□□□ 0.38
VSX2P58304 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 AC005332.3-201ENST00000589904 676 ntBASIC17.43■□□□□ 0.38
VSX2P58304 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.43■□□□□ 0.38
VSX2P58304 AL024508.2-201ENST00000607749 1894 ntBASIC17.43■□□□□ 0.38
VSX2P58304 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms