Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCNKAP51800 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCNKAP51800 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 AP002383.4-201ENST00000442518 975 ntBASIC17.87■□□□□ 0.45
CLCNKAP51800 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.87■□□□□ 0.45
CLCNKAP51800 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCNKAP51800 MIR3180-1-201ENST00000580374 94 ntBASIC17.87■□□□□ 0.45
CLCNKAP51800 MIR3180-3-201ENST00000584616 94 ntBASIC17.87■□□□□ 0.45
CLCNKAP51800 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCNKAP51800 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCNKAP51800 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 AC073592.3-201ENST00000625118 1834 ntBASIC17.86■□□□□ 0.45
CLCNKAP51800 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCNKAP51800 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCNKAP51800 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCNKAP51800 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCNKAP51800 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CLCNKAP51800 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCNKAP51800 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCNKAP51800 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
CLCNKAP51800 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLCNKAP51800 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCNKAP51800 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCNKAP51800 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCNKAP51800 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
CLCNKAP51800 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCNKAP51800 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.85■□□□□ 0.45
CLCNKAP51800 AL353692.3-201ENST00000407031 1396 ntBASIC17.85■□□□□ 0.45
CLCNKAP51800 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 DRAXINP1-201ENST00000437611 948 ntBASIC17.85■□□□□ 0.45
CLCNKAP51800 HCG4P8-203ENST00000443049 980 ntBASIC17.85■□□□□ 0.45
CLCNKAP51800 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCNKAP51800 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCNKAP51800 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.85■□□□□ 0.45
CLCNKAP51800 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCNKAP51800 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCNKAP51800 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLCNKAP51800 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.84■□□□□ 0.45
CLCNKAP51800 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCNKAP51800 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms