Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.6□□□□□ -0.55
UBE2AP49459 B3GAT3P1-201ENST00000471720 806 ntBASIC11.6□□□□□ -0.55
UBE2AP49459 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 CKBP1-201ENST00000565489 1086 ntBASIC11.6□□□□□ -0.55
UBE2AP49459 SLC25A1P4-201ENST00000567977 778 ntBASIC11.6□□□□□ -0.55
UBE2AP49459 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
UBE2AP49459 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 AL390961.4-201ENST00000623958 2535 ntBASIC11.59□□□□□ -0.55
UBE2AP49459 AC009113.1-201ENST00000570267 2443 ntBASIC11.59□□□□□ -0.55
UBE2AP49459 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2AP49459 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.59□□□□□ -0.55
UBE2AP49459 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 MIR718-201ENST00000390190 70 ntBASIC11.59□□□□□ -0.55
UBE2AP49459 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2AP49459 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
UBE2AP49459 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
UBE2AP49459 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.59□□□□□ -0.55
UBE2AP49459 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.59□□□□□ -0.55
UBE2AP49459 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.59□□□□□ -0.55
UBE2AP49459 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UBE2AP49459 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UBE2AP49459 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
UBE2AP49459 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.58□□□□□ -0.55
UBE2AP49459 AC018470.1-201ENST00000624790 3129 ntBASIC11.58□□□□□ -0.56
UBE2AP49459 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
UBE2AP49459 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UBE2AP49459 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2AP49459 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UBE2AP49459 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.58□□□□□ -0.56
UBE2AP49459 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2AP49459 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
UBE2AP49459 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC11.58□□□□□ -0.56
UBE2AP49459 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UBE2AP49459 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms