Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMA1P25391 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMA1P25391 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMA1P25391 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMA1P25391 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 RPS8P6-201ENST00000426177 609 ntBASIC17.79■□□□□ 0.44
LAMA1P25391 METTL21AP1-201ENST00000438852 635 ntBASIC17.79■□□□□ 0.44
LAMA1P25391 OR7E14P-202ENST00000530490 1290 ntBASIC17.79■□□□□ 0.44
LAMA1P25391 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.79■□□□□ 0.44
LAMA1P25391 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.79■□□□□ 0.44
LAMA1P25391 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMA1P25391 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.79■□□□□ 0.44
LAMA1P25391 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMA1P25391 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LAMA1P25391 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.78■□□□□ 0.44
LAMA1P25391 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.78■□□□□ 0.44
LAMA1P25391 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.78■□□□□ 0.44
LAMA1P25391 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LAMA1P25391 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMA1P25391 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.78■□□□□ 0.44
LAMA1P25391 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LAMA1P25391 AL356309.3-201ENST00000624132 1934 ntBASIC17.78■□□□□ 0.44
LAMA1P25391 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMA1P25391 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.78■□□□□ 0.44
LAMA1P25391 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.78■□□□□ 0.44
LAMA1P25391 AC092910.1-201ENST00000482027 1129 ntBASIC17.78■□□□□ 0.44
LAMA1P25391 AC009533.2-201ENST00000543664 586 ntBASIC17.78■□□□□ 0.44
LAMA1P25391 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.78■□□□□ 0.44
LAMA1P25391 MTDHP5-201ENST00000598980 586 ntBASIC17.78■□□□□ 0.44
LAMA1P25391 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.78■□□□□ 0.44
LAMA1P25391 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.77■□□□□ 0.44
LAMA1P25391 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LAMA1P25391 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.77■□□□□ 0.44
LAMA1P25391 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 MIR149-201ENST00000384879 89 ntBASIC17.77■□□□□ 0.44
LAMA1P25391 AC023274.1-201ENST00000418278 595 ntBASIC17.77■□□□□ 0.44
LAMA1P25391 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.77■□□□□ 0.44
LAMA1P25391 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.77■□□□□ 0.44
LAMA1P25391 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.77■□□□□ 0.44
LAMA1P25391 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMA1P25391 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.77■□□□□ 0.43
LAMA1P25391 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.77■□□□□ 0.43
LAMA1P25391 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.77■□□□□ 0.43
LAMA1P25391 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
LAMA1P25391 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LAMA1P25391 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
LAMA1P25391 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.76■□□□□ 0.43
LAMA1P25391 HTR5BP-201ENST00000430851 1154 ntBASIC17.76■□□□□ 0.43
LAMA1P25391 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.76■□□□□ 0.43
LAMA1P25391 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.76■□□□□ 0.43
LAMA1P25391 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
LAMA1P25391 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.76■□□□□ 0.43
LAMA1P25391 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.76■□□□□ 0.43
LAMA1P25391 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMA1P25391 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.76■□□□□ 0.43
LAMA1P25391 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMA1P25391 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.76■□□□□ 0.43
LAMA1P25391 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms