Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
GAPDHP04406 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.31■□□□□ 0.04
GAPDHP04406 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
GAPDHP04406 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.31■□□□□ 0.04
GAPDHP04406 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GAPDHP04406 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
GAPDHP04406 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GAPDHP04406 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 RBM17P1-201ENST00000453646 1190 ntBASIC15.31■□□□□ 0.04
GAPDHP04406 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.31■□□□□ 0.04
GAPDHP04406 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GAPDHP04406 AC066615.1-201ENST00000640911 628 ntBASIC15.31■□□□□ 0.04
GAPDHP04406 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GAPDHP04406 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.31■□□□□ 0.04
GAPDHP04406 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAPDHP04406 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GAPDHP04406 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 AC106820.2-201ENST00000563775 3264 ntBASIC15.3■□□□□ 0.04
GAPDHP04406 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GAPDHP04406 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.3■□□□□ 0.04
GAPDHP04406 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
GAPDHP04406 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.3■□□□□ 0.04
GAPDHP04406 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.3■□□□□ 0.04
GAPDHP04406 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GAPDHP04406 CA15P1-201ENST00000481698 905 ntBASIC15.3■□□□□ 0.04
GAPDHP04406 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GAPDHP04406 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
GAPDHP04406 AP005242.2-201ENST00000580065 1175 ntBASIC15.3■□□□□ 0.04
GAPDHP04406 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 AL645608.8-201ENST00000606034 2086 ntBASIC15.3■□□□□ 0.04
GAPDHP04406 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
GAPDHP04406 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GAPDHP04406 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAPDHP04406 AC084018.2-201ENST00000613093 2607 ntBASIC15.3■□□□□ 0.04
GAPDHP04406 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GAPDHP04406 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.29■□□□□ 0.04
GAPDHP04406 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.29■□□□□ 0.04
GAPDHP04406 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.29■□□□□ 0.04
GAPDHP04406 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAPDHP04406 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.29■□□□□ 0.04
GAPDHP04406 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.29■□□□□ 0.04
GAPDHP04406 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms