Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CBX6O95503 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CBX6O95503 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CBX6O95503 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.22■□□□□ 0.51
CBX6O95503 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.22■□□□□ 0.51
CBX6O95503 HEIH-201ENST00000623091 1652 ntBASIC18.22■□□□□ 0.51
CBX6O95503 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.22■□□□□ 0.51
CBX6O95503 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CBX6O95503 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CBX6O95503 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 AC022211.2-201ENST00000585075 2527 ntBASIC18.21■□□□□ 0.51
CBX6O95503 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 AC141586.5-201ENST00000624546 2050 ntBASIC18.21■□□□□ 0.51
CBX6O95503 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.21■□□□□ 0.51
CBX6O95503 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.21■□□□□ 0.51
CBX6O95503 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.21■□□□□ 0.51
CBX6O95503 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.21■□□□□ 0.51
CBX6O95503 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.21■□□□□ 0.51
CBX6O95503 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CBX6O95503 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CBX6O95503 HTR7P1-201ENST00000538670 1336 ntBASIC18.21■□□□□ 0.51
CBX6O95503 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.21■□□□□ 0.5
CBX6O95503 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CBX6O95503 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CBX6O95503 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.2■□□□□ 0.5
CBX6O95503 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 KRT16P5-201ENST00000455284 522 ntBASIC18.2■□□□□ 0.5
CBX6O95503 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 AC145285.6-201ENST00000604632 637 ntBASIC18.2■□□□□ 0.5
CBX6O95503 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
CBX6O95503 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CBX6O95503 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CBX6O95503 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CBX6O95503 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CBX6O95503 AC124283.5-201ENST00000624661 1809 ntBASIC18.19■□□□□ 0.5
CBX6O95503 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CBX6O95503 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CBX6O95503 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CBX6O95503 AL353807.1-201ENST00000427475 662 ntBASIC18.19■□□□□ 0.5
CBX6O95503 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CBX6O95503 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.19■□□□□ 0.5
CBX6O95503 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms