Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.08■□□□□ 0.33
HCN1O60741 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HCN1O60741 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.08■□□□□ 0.32
HCN1O60741 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.08■□□□□ 0.32
HCN1O60741 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.08■□□□□ 0.32
HCN1O60741 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.08■□□□□ 0.32
HCN1O60741 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
HCN1O60741 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.08■□□□□ 0.32
HCN1O60741 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.08■□□□□ 0.32
HCN1O60741 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.08■□□□□ 0.32
HCN1O60741 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.08■□□□□ 0.32
HCN1O60741 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCN1O60741 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HCN1O60741 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.08■□□□□ 0.32
HCN1O60741 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.08■□□□□ 0.32
HCN1O60741 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HCN1O60741 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCN1O60741 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
HCN1O60741 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HCN1O60741 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
HCN1O60741 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.07■□□□□ 0.32
HCN1O60741 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
HCN1O60741 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
HCN1O60741 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HCN1O60741 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.07■□□□□ 0.32
HCN1O60741 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.07■□□□□ 0.32
HCN1O60741 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
HCN1O60741 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 MYC-208ENST00000641036 567 ntBASIC17.07■□□□□ 0.32
HCN1O60741 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 AC073592.3-201ENST00000625118 1834 ntBASIC17.07■□□□□ 0.32
HCN1O60741 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCN1O60741 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HCN1O60741 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCN1O60741 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HCN1O60741 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.06■□□□□ 0.32
HCN1O60741 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 AC009947.2-201ENST00000444014 672 ntBASIC17.06■□□□□ 0.32
HCN1O60741 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 AC008622.2-201ENST00000617006 1229 ntBASIC17.06■□□□□ 0.32
HCN1O60741 AL023973.1-201ENST00000624619 620 ntBASIC17.06■□□□□ 0.32
HCN1O60741 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.06■□□□□ 0.32
HCN1O60741 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms