Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN6O15212 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.3■□□□□ 0.52
PFDN6O15212 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PFDN6O15212 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PFDN6O15212 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN6O15212 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN6O15212 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN6O15212 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.29■□□□□ 0.52
PFDN6O15212 ECEL1P2-202ENST00000465689 757 ntBASIC18.29■□□□□ 0.52
PFDN6O15212 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PFDN6O15212 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 KRT8P9-201ENST00000558927 1449 ntBASIC18.29■□□□□ 0.52
PFDN6O15212 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.29■□□□□ 0.52
PFDN6O15212 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN6O15212 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PFDN6O15212 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 AC005332.8-201ENST00000622750 2735 ntBASIC18.28■□□□□ 0.52
PFDN6O15212 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.28■□□□□ 0.52
PFDN6O15212 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 AC008687.5-201ENST00000593746 558 ntBASIC18.28■□□□□ 0.52
PFDN6O15212 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.28■□□□□ 0.52
PFDN6O15212 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 CROCCP1-201ENST00000426910 5675 ntBASIC18.28■□□□□ 0.52
PFDN6O15212 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN6O15212 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN6O15212 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN6O15212 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PFDN6O15212 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.52
PFDN6O15212 OR6D1P-203ENST00000641209 4860 ntBASIC18.27■□□□□ 0.52
PFDN6O15212 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PFDN6O15212 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN6O15212 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms