Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK2O00526 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
UPK2O00526 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK2O00526 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK2O00526 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UPK2O00526 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK2O00526 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK2O00526 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 MIR718-201ENST00000390190 70 ntBASIC14.66□□□□□ -0.06
UPK2O00526 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.66□□□□□ -0.06
UPK2O00526 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
UPK2O00526 BX088651.1-201ENST00000540551 451 ntBASIC14.66□□□□□ -0.06
UPK2O00526 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.66□□□□□ -0.06
UPK2O00526 MIR4785-201ENST00000585005 73 ntBASIC14.66□□□□□ -0.06
UPK2O00526 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
UPK2O00526 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK2O00526 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UPK2O00526 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 AC092338.2-201ENST00000568827 1415 ntBASIC14.66□□□□□ -0.06
UPK2O00526 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
UPK2O00526 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK2O00526 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK2O00526 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK2O00526 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK2O00526 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.65□□□□□ -0.06
UPK2O00526 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK2O00526 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK2O00526 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK2O00526 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK2O00526 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK2O00526 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.65□□□□□ -0.06
UPK2O00526 FITM1-202ENST00000559294 800 ntBASIC14.65□□□□□ -0.06
UPK2O00526 AP000525.1-201ENST00000608286 694 ntBASIC14.65□□□□□ -0.06
UPK2O00526 AC116562.4-202ENST00000641738 218 ntBASIC14.65□□□□□ -0.06
UPK2O00526 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK2O00526 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 AC093010.1-201ENST00000473625 1624 ntBASIC14.65□□□□□ -0.06
UPK2O00526 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK2O00526 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UPK2O00526 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK2O00526 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UPK2O00526 LINC00896-202ENST00000609602 2128 ntBASIC14.65□□□□□ -0.06
UPK2O00526 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK2O00526 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UPK2O00526 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK2O00526 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms