Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 AL096828.2-201ENST00000567259 1965 ntBASIC16.88■□□□□ 0.29
CPSF4LA6NMK7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 AC134043.2-201ENST00000624206 2238 ntBASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPSF4LA6NMK7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 AP005242.2-201ENST00000580065 1175 ntBASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.86■□□□□ 0.29
CPSF4LA6NMK7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 PHGDH-209ENST00000641074 1780 ntBASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 LTB4R2-202ENST00000528054 3092 ntBASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 UNC93B2-201ENST00000285383 730 ntBASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 AP003041.3-201ENST00000527151 707 ntBASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.85■□□□□ 0.29
CPSF4LA6NMK7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms