Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.14■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC073508.3-201ENST00000619697 1419 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TERF1P1-201ENST00000311003 1181 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC113347.1-201ENST00000413321 391 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC211429.1-201ENST00000415277 523 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AL441883.1-201ENST00000566170 1045 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC005363.2-201ENST00000618631 242 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC092865.7-201ENST00000641832 219 ntBASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC005521.1-201ENST00000393351 872 ntBASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 FLJ13224-201ENST00000313737 1514 ntBASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV1D-43A0A0B4J1Z2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms