Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 PCED1CP-201ENST00000419887 785 ntBASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 AL359075.1-203ENST00000462729 1002 ntBASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 AL136038.3-201ENST00000561909 1096 ntBASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 CR769767.2-201ENST00000622735 460 ntBASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 MIR4674-201ENST00000582457 87 ntBASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB6Q9Y5F9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGB6Q9Y5F9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 AC116407.4-201ENST00000623319 1061 ntBASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 KRT8P3-201ENST00000519669 1449 ntBASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 IER3-202ENST00000376377 1350 ntBASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB6Q9Y5F9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB6Q9Y5F9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms