Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCAF1Q9Y4C2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 AP000523.1-201ENST00000398242 1049 ntBASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 AC093010.1-201ENST00000473625 1624 ntBASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCAF1Q9Y4C2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 MIR3917-201ENST00000580971 93 ntBASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 AC092865.7-201ENST00000641832 219 ntBASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCAF1Q9Y4C2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 SLC25A6P5-201ENST00000435663 894 ntBASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 AL138966.2-201ENST00000621997 464 ntBASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 AC141257.4-201ENST00000634557 245 ntBASIC18.34■□□□□ 0.53
TCAF1Q9Y4C2 AC136944.6-201ENST00000634818 245 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms