Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 AC116562.4-202ENST00000641738 218 ntBASIC17.24■□□□□ 0.35
RNF6Q9Y252 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 HTR7P1-202ENST00000624664 4411 ntBASIC17.24■□□□□ 0.35
RNF6Q9Y252 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.24■□□□□ 0.35
RNF6Q9Y252 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 CCR12P-201ENST00000446203 998 ntBASIC17.23■□□□□ 0.35
RNF6Q9Y252 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF6Q9Y252 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF6Q9Y252 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 AC022616.7-201ENST00000525383 220 ntBASIC17.22■□□□□ 0.35
RNF6Q9Y252 LINC01238-205ENST00000567549 1107 ntBASIC17.22■□□□□ 0.35
RNF6Q9Y252 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 AC096733.2-201ENST00000609937 1394 ntBASIC17.22■□□□□ 0.35
RNF6Q9Y252 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF6Q9Y252 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF6Q9Y252 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms