Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGC3Q9UN70 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 HBZP1-201ENST00000354915 429 ntBASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 AL359075.1-203ENST00000462729 1002 ntBASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 DUX4L26-201ENST00000489078 1255 ntBASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGC3Q9UN70 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.67
PCDHGC3Q9UN70 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGC3Q9UN70 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGC3Q9UN70 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGC3Q9UN70 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.27■□□□□ 0.67
PCDHGC3Q9UN70 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 SLC25A6P5-201ENST00000435663 894 ntBASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 AC022616.7-201ENST00000525383 220 ntBASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC3Q9UN70 LINC00167-201ENST00000530583 1419 ntBASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 AC132938.6-201ENST00000623828 1655 ntBASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 AC112907.2-201ENST00000448639 330 ntBASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 AC092647.4-201ENST00000457211 535 ntBASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 DUTP2-201ENST00000519164 463 ntBASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms