Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 GPAT2P1-201ENST00000444924 1672 ntBASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 C1QBPP2-201ENST00000528754 825 ntBASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 AC006058.3-201ENST00000606217 1069 ntBASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CDC42SE2Q9NRR3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 AC012317.2-201ENST00000623305 2251 ntBASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE2Q9NRR3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 AC096733.2-201ENST00000609937 1394 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 PRORSD1P-202ENST00000563365 2154 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 AL163051.1-201ENST00000569214 1512 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 ID1-201ENST00000376105 1233 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms