Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AC008687.5-201ENST00000593746 558 ntBASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AC145285.6-201ENST00000604632 637 ntBASIC17.49■□□□□ 0.39
BRF2Q9HAW0 AC066615.1-201ENST00000640911 628 ntBASIC17.49■□□□□ 0.39
BRF2Q9HAW0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.49■□□□□ 0.39
BRF2Q9HAW0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 MIR3917-201ENST00000580971 93 ntBASIC17.48■□□□□ 0.39
BRF2Q9HAW0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.48■□□□□ 0.39
BRF2Q9HAW0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.47■□□□□ 0.39
BRF2Q9HAW0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
BRF2Q9HAW0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms