Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC023274.1-201ENST00000418278 595 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 PMS2P2-201ENST00000425039 1128 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 MTDHP4-201ENST00000600287 670 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC004817.3-201ENST00000602957 2129 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC008735.5-201ENST00000623544 497 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC022898.2-201ENST00000616822 1312 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPS2P28-201ENST00000314255 741 ntBASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC009947.1-201ENST00000444350 727 ntBASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 BX005266.1-201ENST00000473402 457 ntBASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC134684.3-201ENST00000641758 218 ntBASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP4-1Q9BYQ7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 KRT18P2-201ENST00000447938 1258 ntBASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms