Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AC068137.2-201ENST00000605408 478 ntBASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 MIR6787-201ENST00000616675 61 ntBASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AL162274.1-201ENST00000617191 1098 ntBASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 REXO1L6P-201ENST00000603433 1515 ntBASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.38■□□□□ 0.53
COL25A1Q9BXS0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AP005212.1-201ENST00000581547 1997 ntBASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AC004233.3-201ENST00000607794 1269 ntBASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AC009118.2-201ENST00000613275 655 ntBASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 AP001059.3-201ENST00000619053 235 ntBASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL25A1Q9BXS0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 ADH5P3-201ENST00000433842 1137 ntBASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 MIR6727-201ENST00000620702 65 ntBASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 GPR182-203ENST00000622922 591 ntBASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.36■□□□□ 0.53
COL25A1Q9BXS0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 SDHAP1-207ENST00000440850 2000 ntBASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AC129492.6-201ENST00000611383 1305 ntBASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms