Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 AC092720.2-201ENST00000602388 1665 ntBASIC12.76□□□□□ -0.37
VPS25Q9BRG1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS25Q9BRG1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.75□□□□□ -0.37
VPS25Q9BRG1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.75□□□□□ -0.37
VPS25Q9BRG1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS25Q9BRG1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 AP001094.4-201ENST00000579008 2176 ntBASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms