Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 MIR1233-2-201ENST00000408138 82 ntBASIC19.68■□□□□ 0.74
SNX27Q96L92 MIR1233-1-201ENST00000408722 82 ntBASIC19.68■□□□□ 0.74
SNX27Q96L92 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.68■□□□□ 0.74
SNX27Q96L92 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX27Q96L92 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX27Q96L92 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.68■□□□□ 0.74
SNX27Q96L92 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 AC111152.3-201ENST00000569699 673 ntBASIC19.68■□□□□ 0.74
SNX27Q96L92 MIR3652-201ENST00000579335 131 ntBASIC19.68■□□□□ 0.74
SNX27Q96L92 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 AC124864.1-201ENST00000623408 392 ntBASIC19.68■□□□□ 0.74
SNX27Q96L92 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX27Q96L92 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX27Q96L92 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 GMCL1P1-201ENST00000463439 1581 ntBASIC19.67■□□□□ 0.74
SNX27Q96L92 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX27Q96L92 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX27Q96L92 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX27Q96L92 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNX27Q96L92 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX27Q96L92 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX27Q96L92 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX27Q96L92 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX27Q96L92 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.66■□□□□ 0.74
SNX27Q96L92 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 HLA-J-203ENST00000494367 1087 ntBASIC19.66■□□□□ 0.74
SNX27Q96L92 AP000867.3-201ENST00000524675 377 ntBASIC19.66■□□□□ 0.74
SNX27Q96L92 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX27Q96L92 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX27Q96L92 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX27Q96L92 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 AC233702.3-201ENST00000578656 1387 ntBASIC19.66■□□□□ 0.74
SNX27Q96L92 LINC00167-201ENST00000530583 1419 ntBASIC19.66■□□□□ 0.74
SNX27Q96L92 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX27Q96L92 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX27Q96L92 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX27Q96L92 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX27Q96L92 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNX27Q96L92 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX27Q96L92 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNX27Q96L92 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX27Q96L92 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX27Q96L92 ESPNP-201ENST00000270691 2015 ntBASIC19.64■□□□□ 0.74
SNX27Q96L92 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX27Q96L92 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX27Q96L92 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX27Q96L92 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX27Q96L92 WIZP1-201ENST00000531444 2299 ntBASIC19.64■□□□□ 0.74
SNX27Q96L92 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SNX27Q96L92 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 TSPY12P-201ENST00000421279 868 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 AC009078.2-202ENST00000463353 338 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 AC012615.1-201ENST00000565797 1299 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 PRELID1P1-202ENST00000567272 903 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX27Q96L92 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms