Protein–RNA interactions for Protein: Q96EP9

SLC10A4, Sodium/bile acid cotransporter 4, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC10A4Q96EP9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AC211486.1-202ENST00000416371 468 ntBASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AC009947.1-201ENST00000444350 727 ntBASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AC211476.1-201ENST00000503899 468 ntBASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC10A4Q96EP9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 KRT18P28-201ENST00000453838 1332 ntBASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC10A4Q96EP9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 LAGE3P1-201ENST00000425356 484 ntBASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC10A4Q96EP9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 AL596442.2-201ENST00000610240 980 ntBASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC10A4Q96EP9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC10A4Q96EP9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC10A4Q96EP9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC10A4Q96EP9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms