Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 LINC01311-201ENST00000565162 1445 ntBASIC20.76■□□□□ 0.91
TNFRSF25Q93038 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF25Q93038 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 DUTP2-201ENST00000519164 463 ntBASIC20.74■□□□□ 0.91
TNFRSF25Q93038 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF25Q93038 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 AL671277.2-201ENST00000458060 996 ntBASIC20.73■□□□□ 0.91
TNFRSF25Q93038 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 AC008687.5-201ENST00000593746 558 ntBASIC20.73■□□□□ 0.91
TNFRSF25Q93038 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNFRSF25Q93038 LINC00602-201ENST00000629776 2065 ntBASIC20.73■□□□□ 0.91
TNFRSF25Q93038 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 AL031133.1-201ENST00000406807 723 ntBASIC20.72■□□□□ 0.91
TNFRSF25Q93038 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 RNF126P1-202ENST00000569893 925 ntBASIC20.72■□□□□ 0.91
TNFRSF25Q93038 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
TNFRSF25Q93038 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms