Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AC116562.2-201ENST00000507042 360 ntBASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 REXO1L10P-201ENST00000615707 1290 ntBASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AC131212.4-201ENST00000623606 975 ntBASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 AC068587.9-201ENST00000641814 219 ntBASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40AQ8WXH6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 AC009053.2-201ENST00000563701 2365 ntBASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
RAB40AQ8WXH6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 UNC93B2-201ENST00000285383 730 ntBASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 AC211429.1-201ENST00000415277 523 ntBASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 FLJ13224-201ENST00000313737 1514 ntBASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RAB40AQ8WXH6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms