Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCAB3Q8N7B9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFCAB3Q8N7B9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 ATP5G1P1-201ENST00000448724 379 ntBASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCAB3Q8N7B9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 AC004980.1-204ENST00000429707 299 ntBASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 SLC25A3P1-201ENST00000443844 931 ntBASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 DUX4L26-201ENST00000489078 1255 ntBASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCAB3Q8N7B9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 AC083906.6-201ENST00000641366 219 ntBASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms