Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AL022342.1-201ENST00000400363 863 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 MINOS1P3-201ENST00000457048 203 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AL353801.3-201ENST00000609898 542 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AC141586.3-201ENST00000562166 1838 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 AL353692.3-201ENST00000407031 1396 ntBASIC18.55■□□□□ 0.56
PGBD3Q8N328 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.54■□□□□ 0.56
PGBD3Q8N328 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 NUS1P2-201ENST00000417358 873 ntBASIC18.54■□□□□ 0.56
PGBD3Q8N328 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 AC011840.4-201ENST00000578471 627 ntBASIC18.54■□□□□ 0.56
PGBD3Q8N328 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 AC004408.2-201ENST00000623613 2777 ntBASIC18.54■□□□□ 0.56
PGBD3Q8N328 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PGBD3Q8N328 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD3Q8N328 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 AL121912.1-201ENST00000603683 238 ntBASIC18.53■□□□□ 0.56
PGBD3Q8N328 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD3Q8N328 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD3Q8N328 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.52■□□□□ 0.56
PGBD3Q8N328 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD3Q8N328 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD3Q8N328 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD3Q8N328 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD3Q8N328 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD3Q8N328 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms