Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.13■□□□□ 0.49
APLFQ8IW19 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
APLFQ8IW19 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 HMGA1P5-201ENST00000412453 271 ntBASIC18.13■□□□□ 0.49
APLFQ8IW19 AK4P3-201ENST00000418260 669 ntBASIC18.13■□□□□ 0.49
APLFQ8IW19 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 SLC25A1P4-201ENST00000567977 778 ntBASIC18.13■□□□□ 0.49
APLFQ8IW19 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.13■□□□□ 0.49
APLFQ8IW19 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
APLFQ8IW19 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
APLFQ8IW19 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
APLFQ8IW19 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
APLFQ8IW19 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
APLFQ8IW19 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 AC063952.2-201ENST00000498792 1227 ntBASIC18.12■□□□□ 0.49
APLFQ8IW19 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.12■□□□□ 0.49
APLFQ8IW19 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APLFQ8IW19 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 RCC2P6-201ENST00000526625 1557 ntBASIC18.12■□□□□ 0.49
APLFQ8IW19 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
APLFQ8IW19 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 AL162727.3-201ENST00000635661 2787 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 AC004951.3-201ENST00000418645 1148 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.11■□□□□ 0.49
APLFQ8IW19 AC022616.7-201ENST00000525383 220 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
APLFQ8IW19 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.11■□□□□ 0.49
APLFQ8IW19 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.11■□□□□ 0.49
APLFQ8IW19 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 AC011298.2-201ENST00000617989 482 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 AC116562.4-202ENST00000641738 218 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 AL162741.1-201ENST00000565563 1558 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 AP001271.2-201ENST00000624018 1556 ntBASIC18.11■□□□□ 0.49
APLFQ8IW19 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.11■□□□□ 0.49
APLFQ8IW19 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.11■□□□□ 0.49
APLFQ8IW19 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APLFQ8IW19 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APLFQ8IW19 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APLFQ8IW19 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms