Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 AC124864.1-201ENST00000623408 392 ntBASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 DRAXINP1-201ENST00000437611 948 ntBASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 RN7SL606P-201ENST00000472779 293 ntBASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 TPSP2-201ENST00000561760 610 ntBASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 AL592071.1-201ENST00000611956 408 ntBASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDPD4Q6W3E5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 LINC00602-201ENST00000629776 2065 ntBASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 TSPY12P-201ENST00000421279 868 ntBASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GDPD4Q6W3E5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDPD4Q6W3E5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms