Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 AC093677.2-201ENST00000600169 1863 ntBASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D4BQ5SQS7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 RCC2P3-201ENST00000418112 1537 ntBASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 NIFKP9-201ENST00000419265 221 ntBASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH2D4BQ5SQS7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH2D4BQ5SQS7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 AC091390.4-202ENST00000476426 537 ntBASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 AC073648.6-201ENST00000641589 218 ntBASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 AC009053.2-201ENST00000563701 2365 ntBASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.14■□□□□ 0.49
SH2D4BQ5SQS7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4BQ5SQS7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms