Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 CCR12P-201ENST00000446203 998 ntBASIC17.64■□□□□ 0.41
HMGCS1Q01581 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HMGCS1Q01581 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCS1Q01581 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.41
HMGCS1Q01581 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 AC134043.2-201ENST00000624206 2238 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 MIR149-201ENST00000384879 89 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 AC007663.1-201ENST00000438948 1240 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 BX088651.1-201ENST00000540551 451 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 WWOX-216ENST00000569818 525 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 AC116562.4-202ENST00000641738 218 ntBASIC17.63■□□□□ 0.41
HMGCS1Q01581 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS1Q01581 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS1Q01581 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 INGX-201ENST00000359239 846 ntBASIC17.62■□□□□ 0.41
HMGCS1Q01581 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 TSPY15P-201ENST00000457163 923 ntBASIC17.62■□□□□ 0.41
HMGCS1Q01581 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCS1Q01581 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS1Q01581 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms