Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD3P84022 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD3P84022 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD3P84022 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD3P84022 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.69■□□□□ 0.74
SMAD3P84022 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.69■□□□□ 0.74
SMAD3P84022 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
SMAD3P84022 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD3P84022 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.69■□□□□ 0.74
SMAD3P84022 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.69■□□□□ 0.74
SMAD3P84022 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD3P84022 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SMAD3P84022 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD3P84022 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD3P84022 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD3P84022 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SMAD3P84022 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD3P84022 AC009947.1-201ENST00000444350 727 ntBASIC19.68■□□□□ 0.74
SMAD3P84022 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD3P84022 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.68■□□□□ 0.74
SMAD3P84022 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.68■□□□□ 0.74
SMAD3P84022 AP002472.1-201ENST00000577490 586 ntBASIC19.68■□□□□ 0.74
SMAD3P84022 AC011467.2-201ENST00000598425 242 ntBASIC19.68■□□□□ 0.74
SMAD3P84022 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.68■□□□□ 0.74
SMAD3P84022 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.68■□□□□ 0.74
SMAD3P84022 AC107918.4-202ENST00000641623 219 ntBASIC19.68■□□□□ 0.74
SMAD3P84022 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD3P84022 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMAD3P84022 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD3P84022 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMAD3P84022 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.68■□□□□ 0.74
SMAD3P84022 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD3P84022 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD3P84022 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
SMAD3P84022 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.67■□□□□ 0.74
SMAD3P84022 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD3P84022 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.67■□□□□ 0.74
SMAD3P84022 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.67■□□□□ 0.74
SMAD3P84022 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.67■□□□□ 0.74
SMAD3P84022 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.67■□□□□ 0.74
SMAD3P84022 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.67■□□□□ 0.74
SMAD3P84022 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD3P84022 AFG3L1P-217ENST00000557444 2447 ntBASIC19.67■□□□□ 0.74
SMAD3P84022 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD3P84022 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMAD3P84022 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD3P84022 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMAD3P84022 AP002414.3-201ENST00000589352 1468 ntBASIC19.67■□□□□ 0.74
SMAD3P84022 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMAD3P84022 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMAD3P84022 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.66■□□□□ 0.74
SMAD3P84022 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD3P84022 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.66■□□□□ 0.74
SMAD3P84022 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.66■□□□□ 0.74
SMAD3P84022 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD3P84022 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.66■□□□□ 0.74
SMAD3P84022 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms