Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCL20P78556 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL20P78556 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL20P78556 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL20P78556 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.41□□□□□ -0.1
CCL20P78556 BID-214ENST00000617586 542 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 AC110285.6-201ENST00000617652 491 ntBASIC14.41□□□□□ -0.1
CCL20P78556 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCL20P78556 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL20P78556 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL20P78556 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL20P78556 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 AL390719.1-204ENST00000412397 1219 ntBASIC14.4□□□□□ -0.1
CCL20P78556 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 TUBB8P6-201ENST00000436895 1288 ntBASIC14.4□□□□□ -0.1
CCL20P78556 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL20P78556 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCL20P78556 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCL20P78556 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCL20P78556 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCL20P78556 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 AC010980.2-201ENST00000587099 1412 ntBASIC14.4□□□□□ -0.1
CCL20P78556 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL20P78556 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL20P78556 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.39□□□□□ -0.11
CCL20P78556 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL20P78556 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL20P78556 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL20P78556 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL20P78556 CNN2P6-201ENST00000439038 900 ntBASIC14.39□□□□□ -0.11
CCL20P78556 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL20P78556 RPS2P52-201ENST00000469610 820 ntBASIC14.39□□□□□ -0.11
CCL20P78556 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms