Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN20P56880 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN20P56880 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CLDN20P56880 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN20P56880 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN20P56880 KRT18P35-201ENST00000510488 1269 ntBASIC16.77■□□□□ 0.28
CLDN20P56880 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN20P56880 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN20P56880 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN20P56880 NTF6B-201ENST00000591913 560 ntBASIC16.77■□□□□ 0.28
CLDN20P56880 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLDN20P56880 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN20P56880 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN20P56880 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN20P56880 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN20P56880 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN20P56880 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN20P56880 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN20P56880 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN20P56880 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLDN20P56880 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN20P56880 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN20P56880 KRT18P23-201ENST00000435622 1283 ntBASIC16.76■□□□□ 0.27
CLDN20P56880 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN20P56880 AC092647.4-201ENST00000457211 535 ntBASIC16.76■□□□□ 0.27
CLDN20P56880 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 AL445228.2-201ENST00000605589 952 ntBASIC16.76■□□□□ 0.27
CLDN20P56880 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 AC112497.1-201ENST00000624824 639 ntBASIC16.76■□□□□ 0.27
CLDN20P56880 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN20P56880 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN20P56880 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN20P56880 AC138932.1-201ENST00000534164 6830 ntBASIC16.76■□□□□ 0.27
CLDN20P56880 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 AC099398.1-201ENST00000567919 2776 ntBASIC16.75■□□□□ 0.27
CLDN20P56880 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLDN20P56880 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN20P56880 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN20P56880 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN20P56880 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLDN20P56880 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN20P56880 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms