Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LAMP1P11279 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.34■□□□□ 0.37
LAMP1P11279 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LAMP1P11279 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.34■□□□□ 0.37
LAMP1P11279 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.34■□□□□ 0.37
LAMP1P11279 C2orf69P3-201ENST00000565542 1120 ntBASIC17.34■□□□□ 0.37
LAMP1P11279 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.34■□□□□ 0.37
LAMP1P11279 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.34■□□□□ 0.37
LAMP1P11279 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LAMP1P11279 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.34■□□□□ 0.37
LAMP1P11279 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.34■□□□□ 0.37
LAMP1P11279 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LAMP1P11279 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
LAMP1P11279 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.33■□□□□ 0.37
LAMP1P11279 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 LINC01126-201ENST00000623515 1646 ntBASIC17.33■□□□□ 0.37
LAMP1P11279 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LAMP1P11279 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.33■□□□□ 0.37
LAMP1P11279 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 KRT17P2-201ENST00000300992 1314 ntBASIC17.33■□□□□ 0.36
LAMP1P11279 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.36
LAMP1P11279 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.33■□□□□ 0.36
LAMP1P11279 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.33■□□□□ 0.36
LAMP1P11279 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 TSPY15P-201ENST00000457163 923 ntBASIC17.33■□□□□ 0.36
LAMP1P11279 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.33■□□□□ 0.36
LAMP1P11279 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 AC112497.1-201ENST00000624824 639 ntBASIC17.33■□□□□ 0.36
LAMP1P11279 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 AP006294.2-201ENST00000641667 209 ntBASIC17.33■□□□□ 0.36
LAMP1P11279 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LAMP1P11279 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.33■□□□□ 0.36
LAMP1P11279 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMP1P11279 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMP1P11279 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMP1P11279 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.32■□□□□ 0.36
LAMP1P11279 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LAMP1P11279 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LAMP1P11279 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 AC104390.1-201ENST00000555663 520 ntBASIC17.32■□□□□ 0.36
LAMP1P11279 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.32■□□□□ 0.36
LAMP1P11279 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LAMP1P11279 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LAMP1P11279 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 BCL2-203ENST00000589955 5011 ntBASIC17.32■□□□□ 0.36
LAMP1P11279 GNAS-203ENST00000306120 1878 ntBASIC17.32■□□□□ 0.36
LAMP1P11279 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LAMP1P11279 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.32■□□□□ 0.36
LAMP1P11279 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LAMP1P11279 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMP1P11279 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMP1P11279 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms