Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-CO1P00395 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-CO1P00395 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-CO1P00395 AL162741.1-201ENST00000565563 1558 ntBASIC18.73■□□□□ 0.59
MT-CO1P00395 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.73■□□□□ 0.59
MT-CO1P00395 MIR662-201ENST00000384847 95 ntBASIC18.73■□□□□ 0.59
MT-CO1P00395 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-CO1P00395 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.73■□□□□ 0.59
MT-CO1P00395 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-CO1P00395 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-CO1P00395 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-CO1P00395 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-CO1P00395 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
MT-CO1P00395 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-CO1P00395 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
MT-CO1P00395 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.72■□□□□ 0.59
MT-CO1P00395 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.72■□□□□ 0.59
MT-CO1P00395 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.72■□□□□ 0.59
MT-CO1P00395 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
MT-CO1P00395 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
MT-CO1P00395 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-CO1P00395 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-CO1P00395 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-CO1P00395 AC009113.1-201ENST00000570267 2443 ntBASIC18.71■□□□□ 0.59
MT-CO1P00395 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.71■□□□□ 0.59
MT-CO1P00395 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-CO1P00395 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-CO1P00395 SDHAP2-201ENST00000455183 2001 ntBASIC18.71■□□□□ 0.59
MT-CO1P00395 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-CO1P00395 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.71■□□□□ 0.58
MT-CO1P00395 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-CO1P00395 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms