Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 HOMER2P1-201ENST00000455653 964 ntBASIC17.06■□□□□ 0.32
TRIM3O75382 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 GCSHP2-201ENST00000560971 527 ntBASIC17.06■□□□□ 0.32
TRIM3O75382 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM3O75382 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM3O75382 AC068587.9-201ENST00000641814 219 ntBASIC17.06■□□□□ 0.32
TRIM3O75382 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 Z98044.1-201ENST00000632503 1764 ntBASIC17.06■□□□□ 0.32
TRIM3O75382 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 AC093525.10-201ENST00000625130 1569 ntBASIC17.06■□□□□ 0.32
TRIM3O75382 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM3O75382 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRIM3O75382 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM3O75382 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM3O75382 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRIM3O75382 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM3O75382 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 AC092647.4-201ENST00000457211 535 ntBASIC17.05■□□□□ 0.32
TRIM3O75382 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM3O75382 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRIM3O75382 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM3O75382 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM3O75382 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM3O75382 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 FZD10-202ENST00000539839 3282 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 ARMC10P1-201ENST00000313754 855 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 MIR564-202ENST00000385049 94 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRIM3O75382 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM3O75382 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM3O75382 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM3O75382 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM3O75382 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 MYC-208ENST00000641036 567 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM3O75382 AC104581.1-202ENST00000635932 2618 ntBASIC17.04■□□□□ 0.32
TRIM3O75382 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM3O75382 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms