Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.25■□□□□ 0.35
PLOD3O60568 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
PLOD3O60568 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PLOD3O60568 SLC25A3P1-201ENST00000443844 931 ntBASIC17.25■□□□□ 0.35
PLOD3O60568 AC009947.2-201ENST00000444014 672 ntBASIC17.25■□□□□ 0.35
PLOD3O60568 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.25■□□□□ 0.35
PLOD3O60568 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.25■□□□□ 0.35
PLOD3O60568 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 AC133561.5-201ENST00000635547 218 ntBASIC17.25■□□□□ 0.35
PLOD3O60568 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.25■□□□□ 0.35
PLOD3O60568 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PLOD3O60568 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PLOD3O60568 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PLOD3O60568 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 AL162741.1-201ENST00000565563 1558 ntBASIC17.24■□□□□ 0.35
PLOD3O60568 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PLOD3O60568 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.24■□□□□ 0.35
PLOD3O60568 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.24■□□□□ 0.35
PLOD3O60568 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PLOD3O60568 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PLOD3O60568 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PLOD3O60568 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 PCDHB18P-201ENST00000524813 2368 ntBASIC17.23■□□□□ 0.35
PLOD3O60568 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.23■□□□□ 0.35
PLOD3O60568 BICD1-207ENST00000551848 1962 ntBASIC17.23■□□□□ 0.35
PLOD3O60568 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 AP000523.1-201ENST00000398242 1049 ntBASIC17.23■□□□□ 0.35
PLOD3O60568 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.23■□□□□ 0.35
PLOD3O60568 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.23■□□□□ 0.35
PLOD3O60568 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.23■□□□□ 0.35
PLOD3O60568 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 AC009065.1-201ENST00000564055 1225 ntBASIC17.23■□□□□ 0.35
PLOD3O60568 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.23■□□□□ 0.35
PLOD3O60568 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 AL138966.2-201ENST00000621997 464 ntBASIC17.23■□□□□ 0.35
PLOD3O60568 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PLOD3O60568 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PLOD3O60568 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PLOD3O60568 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PLOD3O60568 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
PLOD3O60568 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PLOD3O60568 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.22■□□□□ 0.35
PLOD3O60568 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PLOD3O60568 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.22■□□□□ 0.35
PLOD3O60568 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms