Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.95■□□□□ 0.46
VGLL3A8MV65 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.95■□□□□ 0.46
VGLL3A8MV65 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
VGLL3A8MV65 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VGLL3A8MV65 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VGLL3A8MV65 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VGLL3A8MV65 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 AL359258.3-201ENST00000622910 2331 ntBASIC17.94■□□□□ 0.46
VGLL3A8MV65 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 MIR939-201ENST00000401314 82 ntBASIC17.94■□□□□ 0.46
VGLL3A8MV65 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.94■□□□□ 0.46
VGLL3A8MV65 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VGLL3A8MV65 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.94■□□□□ 0.46
VGLL3A8MV65 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 AC100803.2-201ENST00000562459 1963 ntBASIC17.93■□□□□ 0.46
VGLL3A8MV65 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 AP001330.3-201ENST00000520123 633 ntBASIC17.93■□□□□ 0.46
VGLL3A8MV65 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VGLL3A8MV65 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VGLL3A8MV65 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VGLL3A8MV65 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.92■□□□□ 0.46
VGLL3A8MV65 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms