Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC099398.1-201ENST00000567919 2776 ntBASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 AL359736.2-201ENST00000621992 437 ntBASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF103-CHMP3A0A140T963 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF103-CHMP3A0A140T963 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF103-CHMP3A0A140T963 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.64■□□□□ 0.42
RNF103-CHMP3A0A140T963 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF103-CHMP3A0A140T963 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.64■□□□□ 0.42
RNF103-CHMP3A0A140T963 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 KRT8P32-201ENST00000512863 1461 ntBASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC009053.2-201ENST00000563701 2365 ntBASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF103-CHMP3A0A140T963 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 KRT18P29-201ENST00000397031 1267 ntBASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM207BP-201ENST00000447172 505 ntBASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC008040.2-201ENST00000461049 708 ntBASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 CKBP1-201ENST00000565489 1086 ntBASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF103-CHMP3A0A140T963 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms